The MEDx Tutorial Collection and Tutorial Manual

Note: You will need the Adobe Acrobat Reader to view these files - the following are in PDF format.

  1. MEDx Overview
  2. ROI Analysis
  3. Histogram, Line Profile and Statistics
  4. Time Activity Curve
  5. Saving Pages/Images for Exporting
  6. Data Conversion
  7. Image Calculator
  8. Interactive Segmentation "Deskulling the Brain"
  9. Volume Rendering
  10. Anatomical Reorientation
  11. Motion Correction using AIR
  12. AIR: Multi-Modal Registration and Shadow Transform
  13. Image Fusion (Interactive Colorwash)
  14. Talairach Atlas Registration
  15. Surface Registration with Multiple Contours
  16. Image Thresholding and Mask Creation
  17. Linear Temporal Filtering on Synthetic Data
  18. Temporal Display
  19. Single Subject Functional MR Image Analysis (unpaired t-test)
  20. Creation of Design Matrices
  21. Multiple Linear Regression Analysis
  22. Group Analysis Tutorial
  23. Single Subject FMRI Analysis Using SPM
  24. Single Subject PET Study with 2 Conditions and One Covariate
  25. Multi-Subject PET Analysis Using SPM99
  26. Realigning Images Using SPM
  27. Coregistering Images with SPM
  28. Smoothing Images in SPM
  29. Spatial Normalization Using SPM
  30. SPM Plotting
  31. Eigen Image Analysis Using SPM
  32. SPM Conjunction Analysis
  33. Tissue Segmentation Using SPM
  34. DICOM
  35. Extracting the Brain in FSL
  36. Perfusion Analysis Tutorial
  37. An Introduction to Scripting in MEDx (ImageScript)
  38. Advanced Scripting in MEDx (ImageScript)
  39. fMRI Study of Auditory Stimulation (Correlation Analysis)
  40. Example Analysis of an fMRI Data Set using SPM99

The Complete Tutorial Manual in PDF